Index

C

compare_denoised_histo() (in module MRIsegm.processing) contour_slices() (in module MRIsegm.processing) create_segmentation_generator() (in module MRIsegm.datagenerators)

crop() (MRIsegm.datagenerators.DataGenerator method) crop_image() (in module MRIsegm.processing) crop_masks() (in module MRIsegm.processing)

D

DataGenerator (class in MRIsegm.datagenerators) denoise() (in module MRIsegm.processing) (MRIsegm.datagenerators.DataGenerator method) denoise_nlm() (in module MRIsegm.processing) denoise_slices() (in module MRIsegm.processing) dice_coef() (in module MRIsegm.metrics)

dice_loss() (in module MRIsegm.losses) DiceBCEloss() (in module MRIsegm.losses) display() (in module MRIsegm.graphics) display_image() (in module MRIsegm.utils) display_images() (in module MRIsegm.utils) display_overlap() (in module MRIsegm.graphics) display_predictions() (in module MRIsegm.graphics)

E

explore_roi() (in module MRIsegm.utils)

explore_slices() (in module MRIsegm.utils)

G

gamma_correction() (in module MRIsegm.processing) (MRIsegm.datagenerators.DataGenerator method)

get_rois() (in module MRIsegm.utils) get_slices() (in module MRIsegm.utils) get_slices_info() (in module MRIsegm.utils)

M

make_mask() (in module MRIsegm.utils) mask_slices() (in module MRIsegm.utils) module MRIsegm.datagenerators MRIsegm.graphics MRIsegm.losses MRIsegm.metrics MRIsegm.models MRIsegm.processing MRIsegm.utils MRIsegm.datagenerators module

MRIsegm.graphics module MRIsegm.losses module MRIsegm.metrics module MRIsegm.models module MRIsegm.processing module MRIsegm.utils module

N

num_data (MRIsegm.datagenerators.DataGenerator property)

O

otsu_thresholding() (in module MRIsegm.processing)

P

plot_history() (in module MRIsegm.graphics) plot_random_layer() (in module MRIsegm.utils)

pre_processing_data() (in module MRIsegm.processing) predict_images() (in module MRIsegm.processing) predict_slices() (in module MRIsegm.processing)

R

random_hflip() (MRIsegm.datagenerators.DataGenerator method) random_vflip() (MRIsegm.datagenerators.DataGenerator method) randomize() (MRIsegm.datagenerators.DataGenerator method) read_slices() (in module MRIsegm.utils)

rescale() (in module MRIsegm.processing) (in module MRIsegm.utils) (MRIsegm.datagenerators.DataGenerator method) resize() (MRIsegm.datagenerators.DataGenerator method) resize_slices() (in module MRIsegm.processing)

S

show_dataset() (in module MRIsegm.graphics) show_image_histogram() (in module MRIsegm.processing) show_multiple_overlap() (in module MRIsegm.graphics)

show_multiple_predictions() (in module MRIsegm.graphics) show_prediction() (in module MRIsegm.graphics) show_slice_histogram() (in module MRIsegm.processing) soft_dice_loss() (in module MRIsegm.losses)

U

unet() (in module MRIsegm.models)

W

write_contour() (in module MRIsegm.processing)